Tootfinder

X/Twitter finds my activity suspicious. Of multiple accounts. Because I am using VPNs? Because I don't post? Because I am logging in every few months? I haven't even used my delete script on those accounts https://www.youtube.com/watch?v=jB1-z6LbX5w

Scalable Identification of Minimum Undesignable RNA Motifs on Loop-Pair Graphs
Tianshuo Zhou, Wei Yu Tang, David H. Mathews, Liang Huang
https://arxiv.org/abs/2402.17206

Scalable Identification of Minimum Undesignable RNA Motifs on Loop-Pair Graphs
Motivation: RNA design aims to find at least one sequence that folds with the highest probability into a designated target structure, but some structures are undesignable in the sense that no sequence folds into them. Identifying undesignable structures is useful in delineating and understanding the limit of RNA designability, but has received little attention until recently. In addition, existing methods on undesignability are not scalable and not interpretable. Results: We introduce a novel…

This https://arxiv.org/abs/2312.11320 has been replaced.
link: https://scholar.google.com/scholar?q=a

Incoherent ${\rm J}/ψ$ production at large $|t|$ identifies the onset of saturation at the LHC
We predict that the onset of gluon saturation can be uniquely identified using incoherent ${\rm J}/ψ$ production in Pb$\unicode{x2013}$Pb collisions at currently accessible energies of the LHC. The diffractive incoherent photo-production of a ${\rm J}/ψ$ vector meson off a hadron provides information on the partonic structure of the hadron. Within the Good-Walker approach it specifically measures the variance over possible target configurations of the hadronic colour field. For this process t…

Fr: Keyboard kaputt, identischen Ersatz bestellt
Sa/So: Ärgere mich mit der leicht andere Tastenbelegung des Ersatz-Keyboards rum, weil Finger-Automatismen nicht funktionieren
Mo: Ersatz ist da. Ärgere mich mit der Tastenbelegung rum, weil Finger schon umgelernt haben
Grrrr.

Der letzte Tag der diesjährigen @… beginnt mit einem Bühnenaufbau. Wir haben die Ehre, eine Premieraufführung des theater MINESTRONE sehen und hören zu dürfen. Mehr dazu:
https://

Geheimplan gegen Deutschland - szenische Lesung HIP 5
„Geheimplan gegen Deutschland“ „Rechtes Treffen in Potsdam“ „Düsseldorfer Forum“ „Geheimtreffen im Hotel Adlon“ Es gibt viele Begriffe für das, was sich im November 2023 hinter verschlossenen Türen in Potsdamer Hotel Adlon abspielte und was im Januar 2024 von Journalisten der Non-Profit-Organisation Correctiv veröffentlicht wurde. Unter Beteiligung von Vertretern der Wirtschaft, AfD-Funktionären, Mitgliedern der Werteunion sowie Identitären, Burschenschaftern, Ju…

This https://arxiv.org/abs/2311.08339 has been replaced.
initial toot: https://mastoxiv.page/@arXiv_qbi…

Undesignable RNA Structure Identification via Rival Structure Generation and Structure Decomposition
RNA design is the search for a sequence or set of sequences that will fold into predefined structures, also known as the inverse problem of RNA folding. While numerous RNA design methods have been invented to find sequences capable of folding into a target structure, little attention has been given to the identification of undesignable structures according to the minimum free energy (MFE) criterion under the Turner model. In this paper, we address this gap by first introducing mathematical theo…

A visualization tool to explore alphabet orderings for the Burrows-Wheeler Transform
Lily Major, Dave Davies, Amanda Clare, Jacqueline W. Daykin, Benjamin Mora, Christine Zarges
https://arxiv.org/abs/2402.17005

A visualization tool to explore alphabet orderings for the Burrows-Wheeler Transform
The Burrows-Wheeler Transform (BWT) is an efficient invertible text transformation algorithm with the properties of tending to group identical characters together in a run, and enabling search of the text. This transformation has extensive uses particularly in lossless compression algorithms, indexing, and within bioinformatics for sequence alignment tasks. There has been recent interest in minimizing the number of identical character runs ($r$) for a transform and in finding useful alphabet or…

My aunt--my bio father's sister, the 1st person I contacted when I identified my paternity--has had 3 run-ins w/ cancer over the last 30 yrs. This time, cancer's going to win; she was released into hospice last month, & her daughter (my fave cousin) let me know over the weekend that she has very little time left. Maybe 2 wks. I wish I could visit her 1 last time, but since I can't travel right now, I made her a video & sent it last night.
It's not the same, tho…

Fr: Keyboard kaputt, identischen Ersatz bestellt
Sa/So: Ärgere mich mit der leicht andere Tastenbelegung des Ersatz-Keyboards rum, weil Finger-Automatismen nicht funktionieren
Mo: Ersatz ist da. Ärgere mich mit der Tastenbelegung rum, weil Finger schon umgelernt haben
Grrrr.